Package index
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add_chromato_line()
- Add chromato line
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baseline_chromatogram()
- Baseline chromatogram
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change_intensity_name()
- Change intensity name
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check_chromatograms()
- Check chromatograms
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check_chromatograms_alignment()
- Check chromatograms alignment
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check_export_dir()
- Check export dir
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check_peaks_integration()
- Check chromatograms alignment
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compare_peaks()
- Compare peaks
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deriv()
- Deriv
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extract_chromatogram()
- Extract chromatogram
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extract_ms_peak()
- Extract MS peak
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extract_ms_progress()
- Extract MS progress
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filter_fft()
- Filter FFT
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format_gt()
- Temp GT function
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generate_ids()
- Generate IDs
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generate_pseudochromatograms()
- Generate pseudochromatograms
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generate_tables()
- Generate IDs
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get_peaks()
- Get peaks
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hierarchies_grouped_progress()
- Hierarchies grouped progress
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hierarchies_progress()
- Hierarchies Progress
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histograms_progress()
- Histograms progress
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improve_signal()
- Improve signal
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improve_signals_progress()
- Improve signals progress
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join_peaks()
- Join peaks
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keep_best_candidates()
- Keep best candidates
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load_annotations()
- Load annotations
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load_chromatograms()
- Load chromatograms
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load_features()
- Load features
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load_features_informed()
- Load features informed
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load_features_not_informed()
- Load features not informed
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load_ms_data()
- Load MS data
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load_name()
- Load name
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make_chromatographiable()
- Make chromatographiable
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make_confident()
- Make confident
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make_no_stereo()
- Make no stereo
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make_other()
- Make other
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middle_pts()
- Middle pts
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molinfo()
- Molinfo
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no_other()
- No other
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normalize_chromato()
- Normalize chromato
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normalize_chromatograms_list()
- Normalize chromatograms list
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p_acn_i()
- P ACN I
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peaks_progress()
- Peaks progress
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plot_chromatogram()
- Plot chromatogram
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plot_histograms()
- Plot histograms
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plot_histograms_confident()
- Plot histograms confident
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plot_histograms_litt()
- Plot histograms litt
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plot_histograms_taxo()
- Plot histograms taxo
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plot_peak_detection()
- Plot peak detection
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plot_results_1()
- Plot results 1
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plot_results_2()
- Plot results 2
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predict_response()
- Predict response
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prehistograms_progress()
- Prehistograms progress
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prepare_comparison()
- Prepare comparison
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prepare_features()
- Prepare features
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prepare_hierarchy()
- Prepare hierarchy
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prepare_mz()
- Prepare mz
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prepare_peaks()
- Prepare peaks
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prepare_plot()
- Prepare plot
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prepare_plot_2()
- Prepare plot 2
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prepare_rt()
- Prepare rt
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preprocess_chromatograms()
- Preprocess chromatograms
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preprocess_peaks()
- Preprocess peaks
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process_compare_peaks()
- Process compare peaks
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queries_progress()
- Queries progress
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save_histograms_progress()
- Save histograms progress
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save_treemaps_progress()
- Save treemaps progress
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second_der()
- Second der
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signal_sharpening()
- Signal sharpening
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tables_progress()
- Tables progress
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taxon_name_to_qid()
- Taxon name to QID
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transform_ms()
- Transform MS
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treemaps_progress()
- Treemaps progress
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treemaps_progress_no_title()
- Treemaps progress no title
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wiki_progress()
- Wiki progress
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y_as_na()
- Y as NA