Generate pseudochromatograms

Usage

generate_pseudochromatograms(
  annotations = NULL,
  features_informed = NULL,
  features_not_informed = NULL,
  file = NULL,
  headers = c("BasePeak_0", "PDA#1_TotalAbsorbance_0", "UV#1_CAD_1_0"),
  detector = "cad",
  show_example = FALSE,
  min_confidence = 0.4,
  min_similarity_prefilter = 0.6,
  min_similarity_filter = 0.8,
  mode = "pos",
  organism = "Swertia chirayita",
  fourier_components = 0.01,
  frequency = 1,
  resample = 1,
  shift = 0.05,
  time_min = 0.5,
  time_max = 32.5
)

Arguments

annotations: Annotations
features_informed: Features informed
features_not_informed: Features not informed
file: File
headers: Headers
detector: Detector
show_example: Show example? Default to FALSE
min_confidence: Min confidence
min_similarity_prefilter: Min similarity pre filter
min_similarity_filter: Min similarity filter
mode: Mode
organism: Organism
fourier_components: Fourier components
frequency: Frequency
resample: Resample
shift: Shift
time_min: Time min
time_max: Time max

Value

A list of plots

Examples

if (FALSE) { # \dontrun{
generate_pseudochromatograms(show_example = TRUE)
} # }