Check chromatograms alignment — check_peaks_integration • cascade

Check chromatograms alignment

Usage

check_peaks_integration(
  file = NULL,
  features = NULL,
  detector = "cad",
  chromatogram = "baselined",
  min_area = 0.005,
  min_intensity = 10000,
  shift = 0.05,
  show_example = FALSE,
  fourier_components = 0.01,
  time_min = 0.5,
  time_max = 32.5,
  frequency = 1,
  resample = 1
)

Arguments

file: File path
features: Features path
detector: Detector
chromatogram: Chromatogram
min_area: Minimum area
min_intensity: Minimum intensity
shift: shift
show_example: Show example? Default to FALSE
fourier_components: Fourier components
time_min: Time min
time_max: Time max
frequency: Frequency
resample: Resample

Value

A plot with (non-)aligned chromatograms

Examples

if (FALSE) { # \dontrun{
check_peaks_integration(show_example = TRUE)
} # }