generate_pseudochromatograms

Generate pseudochromatograms

Description

Generate pseudochromatograms

Usage

generate_pseudochromatograms(
  annotations = NULL,
  features_informed = NULL,
  features_not_informed = NULL,
  file = NULL,
  headers = c(bpi = "BasePeak_0", pda = "PDA#1_TotalAbsorbance_0", cad = "UV#1_CAD_1_0"),
  detector = "cad",
  show_example = FALSE,
  min_confidence = 0.4,
  min_similarity_prefilter = 0.6,
  min_similarity_filter = 0.8,
  mode = "pos",
  organism = "Swertia chirayita",
  fourier_components = 0.01,
  frequency = 1,
  resample = 1,
  shift = 0.05,
  time_min = 0.5,
  time_max = 32.5
)

Arguments

annotations Annotations

features_informed Features informed

features_not_informed Features not informed

file File

headers Headers

detector Detector

show_example Show example? Default to FALSE

min_confidence Min confidence

min_similarity_prefilter Min similarity pre filter

min_similarity_filter Min similarity filter

mode Mode

organism Organism

fourier_components Fourier components

frequency Frequency

resample Resample

shift Shift

time_min Time min

time_max Time max

Value

A list of plots

Examples

library("cascade")

generate_pseudochromatograms(show_example = TRUE)