check_chromatograms_alignment

Check chromatograms alignment

Description

Check chromatograms alignment

Usage

check_chromatograms_alignment(
  file_negative = NULL,
  file_positive = NULL,
  time_min = 0.5,
  time_max = 32.5,
  cad_shift = 0.05,
  pda_shift = 0.1,
  fourier_components = 0.01,
  frequency = 1,
  resample = 1,
  chromatograms = c("bpi_pos", "cad_pos", "pda_pos"),
  headers = c(bpi = "BasePeak_0", pda = "PDA#1_TotalAbsorbance_0", cad = "UV#1_CAD_1_0"),
  type = "baselined",
  normalize_intensity = TRUE,
  normalize_time = FALSE,
  show_example = FALSE
)

Arguments

file_negative Negative file path

file_positive Positive file path

time_min Minimum time

time_max Maximum time

cad_shift CAD shift

pda_shift PDA shift

fourier_components Fourier components

frequency Frequency

resample Resample

chromatograms Chromatograms to plot

headers Headers

type Type. "baselined" or "improved"

normalize_intensity Normalize intensity? Default to TRUE

normalize_time Normalize time? Default to FALSE

show_example Show example? Default to FALSE

Value

A plot with (non-)aligned chromatograms

Examples

library("cascade")

check_chromatograms_alignment(show_example = TRUE)